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RCSB PDB - 1S9K: Crystal Structure of Human NFAT1 and Fos-Jun on the IL-2 ARRE1 Site

RCSB Protein Data Bank

 1S9K | pdb_00001s9k

Crystal Structure of Human NFAT1 and Fos-Jun on the IL-2 ARRE1 Site



    This is version 1.3 of the entry. See complete history. 



    Literature

    Macromolecule Content 

    • Total Structure Weight: 56.65 kDa 
    • Atom Count: 3,887 
    • Modeled Residue Count: 425 
    • Deposited Residue Count: 425 
    • Unique protein chains: 3
    • Unique nucleic acid chains: 2

    Macromolecules


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    (by identity cutoff)  |  3D Structure

    Entity ID: 3
    MoleculeChains Sequence LengthOrganismDetailsImage
    Nuclear factor of activated T-cells, cytoplasmic 2280Homo sapiensMutation(s): 0 
    Gene Names: NFATC2, NFAT1, NFATP
    UniProt & NIH Common Fund Data Resources

    Find proteins for Q13469 (Homo sapiens)

    Explore Q13469 

    Go to UniProtKB:  Q13469

    PHAROS:  Q13469

    GTEx:  ENSG00000101096 

    Entity Groups  
    Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
    UniProt GroupQ13469
    Sequence Annotations
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    • Reference Sequence

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    Entity ID: 4
    MoleculeChains Sequence LengthOrganismDetailsImage
    Proto-oncogene protein c-fos53Homo sapiensMutation(s): 0 
    Gene Names: FOS, G0S7
    UniProt & NIH Common Fund Data Resources

    Find proteins for P01100 (Homo sapiens)

    Explore P01100 

    Go to UniProtKB:  P01100

    PHAROS:  P01100

    GTEx:  ENSG00000170345 

    Entity Groups  
    Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
    UniProt GroupP01100
    Sequence Annotations
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    • Reference Sequence

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    Entity ID: 5
    MoleculeChains Sequence LengthOrganismDetailsImage
    Transcription factor AP-152Homo sapiensMutation(s): 0 
    Gene Names: JUN
    UniProt & NIH Common Fund Data Resources

    Find proteins for P05412 (Homo sapiens)

    Explore P05412 

    Go to UniProtKB:  P05412

    PHAROS:  P05412

    GTEx:  ENSG00000177606 

    Entity Groups  
    Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
    UniProt GroupP05412
    Sequence Annotations
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    • Reference Sequence

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    Entity ID: 1
    MoleculeChains LengthOrganismImage
    Human IL-2 ARRE1 Promoter Element, Plus Strand20N/A
    Sequence Annotations
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    • Reference Sequence

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    Entity ID: 2
    MoleculeChains LengthOrganismImage
    Human IL-2 ARRE1 Promoter Element, Minus Strand20N/A
    Sequence Annotations
    Expand
    • Reference Sequence

    Experimental Data & Validation

    Experimental Data

    • Method: X-RAY DIFFRACTION
    • Resolution: 3.10 Å
    • R-Value Free:  0.275 (Depositor), 0.280 (DCC) 
    • R-Value Work:  0.242 (Depositor), 0.250 (DCC) 
    • R-Value Observed: 0.242 (Depositor) 

    Unit Cell:

    Length ( Å )Angle ( ˚ )
    a = 64.769α = 90
    b = 86.26β = 111.24
    c = 84.044γ = 90

    Software Package:

    Software NamePurpose
    DENZOdata reduction
    SCALEPACKdata scaling
    CNSrefinement
    CNSphasing

    Entry History 

    Revision History  (Full details and data files)

    • Version 1.0: 2005-06-14
      Type: Initial release
    • Version 1.1: 2008-04-29
      Changes: Version format compliance
    • Version 1.2: 2011-07-13
      Changes: Version format compliance
    • Version 1.3: 2024-02-14
      Changes: Data collection, Database references